CDS
| Accession Number | TCMCG057C49113 |
| gbkey | CDS |
| Protein Id | XP_018453270.1 |
| Location | complement(join(18497619..18497768,18497845..18497964,18498048..18498216,18498313..18499270,18499354..18499672)) |
| Gene | LOC108824356 |
| GeneID | 108824356 |
| Organism | Raphanus sativus |
Protein
| Length | 571aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018597768.1 |
| Definition | PREDICTED: 20S-pre-rRNA D-site endonuclease nob1-like [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | O |
| Description | Nin one binding (NOB1) Zn-ribbon like (InterPro IPR014881), D-site 20S pre-rRNA nuclease (InterPro IPR017117) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] ko03051 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11883
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] map03008 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGATCCGAAACCAGTATCGATGTGGAGTTCCATAGTGAAGAAAGATCCCCCCTCAAAGCCTCCGACAACCGACGTAGCTCCGTCGGCGATTCTCGGTATGGTCGGAACCTGCAAATCCACAAAGGGGATATCTATGGCGGTTGTCGACGCCAACGCCGTCATCGACGGTAGCCATAGCCTAACCAGCTTCGCCGACAAATTCGTAACCGTCCCCGAAGTGCTCTCGGAGATTCGCGACCCCGATTCTCGCCGTCGTCTCGAATTCATCCCTTTCACCATCGAAACCATGGAGCCTTCTCCTGAATCTCTCAGTAAAGTTATTAAATTTGCTAAAGCTACTGGTGATTTGCAAACACTCTCTGATGTTGATCTTAAGTTGATTGCCTTGACGTACACGCTTGAGGCTGAGGTTCACGGGACTAAGAATCTTAGAGATGTTCCTCCGCCTATTCAAACTGTTAGGGTTAGGAGATTACCTGAGAAGGAGTTACCTGGCTGGGGATCCAATGTGGCTAACTTGGAGGAGTGGGAGGCACTTGAGGACGAGGCCGAGGAGAAATCGAACGCTACTTCCAAGATCCTTCCGCTTAAAGACCTTAACATGAACATACTTCCCTCGGACAGCTGTTCTGAGGTTGGTGATGTTGCGTCTCATACTGAGGGTCGAGAAGAGGATGAGGAGAGGAGAGAGAAGAGGTACCCGCCTAAGAAAACAGAGGTGAAGCTTGAGGGTAAGATGGTGGTGGAAGGAATAGATGCATCGCAGGGGGGAAATGATGATGAAGATGGTGGTGAATGGAGACCTGCGGTTAGTAGCAGTACTCACAGGAAGTTCCTTAGGAGAAAGGCCAAGTGGGAACATTACAATGCCTTGTCTGAGCAAGAGTTTCAGAAAGATCAAGAAGCTGACAAAGCTGGTGAAAAGTGTGGAAAAGATAGCGGAAAGGATTATGGAGAGCTTTCGTCCATCTTAAAAGATATTAGGTTGGAGGAAGACTCATTAAAGGCTCTCCAAGAAGAACCTGAAGAGGCGAATGGTGAGGATGATACTGAAGTCGAAGCTGAGGGGGTCGACATTGCTAGTGAGGATGGTGATACCTTTGAGGCATCATCGATGGCAGATGATGGTAGCAGCGAGCAGAGTTGGTCGTTGAGAGCCTTATCTGAGTCCAGTGTAGCTTGTATAACCGGTGACTACGCGATGCAAAATGTTATTATTCAAATGGGTTTGCGTTTGCTTGCACCGGGAGGTATGCAAATTCGCCAACTAAACAGGTGGGTGTTGAAATGCCATGCTTGCTACACAGTAACTCCTGAAATTGGAAGAATCTTCTGTCCCAAGTGCGGTAATGGCGGCACTCTGCGCAAAGTAGCGGTTACAATAGGCGAGAATGGCACCATCATAGCTGCACGTAAGCCACGTGTAACACTTCGAGGGACTAAATTTTCGATACCGATGCCTAAAAGCGGAAGAGACGCAATCACCAAGAATCTGGTTCTTAGGGAAGATCAACTTCCTCAAAAGTACCTCCATCCCAAGACCAAGAAGAAAGCAAGCAAAGCGGGAGATGAGTATTTTATATCAGACGATGTGTTCATGAACCATCACAGTGATAAAAAGGCACCATTGCAGCCTCCAGTGAGAAAAGCTATGGCGGTTTTCAGTCAGAAACGAAACCCTAATGACAACCATTACTCGCGTTCTATGCACTGA |
| Protein: MDPKPVSMWSSIVKKDPPSKPPTTDVAPSAILGMVGTCKSTKGISMAVVDANAVIDGSHSLTSFADKFVTVPEVLSEIRDPDSRRRLEFIPFTIETMEPSPESLSKVIKFAKATGDLQTLSDVDLKLIALTYTLEAEVHGTKNLRDVPPPIQTVRVRRLPEKELPGWGSNVANLEEWEALEDEAEEKSNATSKILPLKDLNMNILPSDSCSEVGDVASHTEGREEDEERREKRYPPKKTEVKLEGKMVVEGIDASQGGNDDEDGGEWRPAVSSSTHRKFLRRKAKWEHYNALSEQEFQKDQEADKAGEKCGKDSGKDYGELSSILKDIRLEEDSLKALQEEPEEANGEDDTEVEAEGVDIASEDGDTFEASSMADDGSSEQSWSLRALSESSVACITGDYAMQNVIIQMGLRLLAPGGMQIRQLNRWVLKCHACYTVTPEIGRIFCPKCGNGGTLRKVAVTIGENGTIIAARKPRVTLRGTKFSIPMPKSGRDAITKNLVLREDQLPQKYLHPKTKKKASKAGDEYFISDDVFMNHHSDKKAPLQPPVRKAMAVFSQKRNPNDNHYSRSMH |